Stem-loop abu-mir-135c

Accession

MI0033872

Description

Astatotilapia burtoni abu-mir-135c precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUAUGUGAugaugaaaaguguucAUGUAGGAACAGAAGCCAUUUU
.(((((((((..(((((((((((..((.....))..))))))))))).)))))))))...

Structure

--U         UA           ug  g 
   AUGGCUUUU  UUCCUAUGUGA  au a
   |||||||||  |||||||||||  || a
   UACCGAAGA  AAGGAUGUAcu  ug a
UUU         -C           ug  a 

Annotation confidence Not enough data

Genome context

JH425708.1: 291159-291218 [+]

Mature abu-miR-135c-5p

• Accession: MIMAT0042156
• Description: Astatotilapia burtoni abu-miR-135c-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-135c-3p

• Accession: MIMAT0042157
• Description: Astatotilapia burtoni abu-miR-135c-3p mature miRNA
• Sequence: 39 - AUGUAGGAACAGAAGCCAUUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381