miRBase entry: abu-mir-219-2

Stem-loop abu-mir-219-2


Accession
MI0033874
Description
Astatotilapia burtoni abu-mir-219-2 precursor miRNA


Sequence

UGAUUGUCCAAACGCAAUUCUUGaguaaacucauauucaaccccaagaauuguguauggacaucugu
.(((.(((((.((((((((((((....................)))))))))))).))))))))...

Structure
--U   U     A            aguaaacuc 
   GAU GUCCA ACGCAAUUCUUG         a
   ||| ||||| ||||||||||||          
   cua caggu uguguuaagaac         u
ugu   -     a            cccaacuua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH425577.1: 120999-121065 [-]

Database links

Mature abu-miR-219-5p

Accession MIMAT0042152
Description Astatotilapia burtoni abu-miR-219-5p mature miRNA
Sequence 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381