miRBase entry: abu-mir-33-2

Stem-loop abu-mir-33-2


Accession
MI0033878
Description
Astatotilapia burtoni abu-mir-33-2 precursor miRNA


Sequence

GUGCAUUGUAGUUGCAUUGCAUgugugucucagcugagugcaauguaccugcagugcaaca
.((((((((((.((((((((((..((......))...)))))))))).))))))))))...

Structure
--G          U          -gu  gu 
   UGCAUUGUAG UGCAUUGCAU   gu  c
   |||||||||| ||||||||||   ||   
   acgugacguc auguaacgug   cg  u
aca          c          agu  ac 


Annotation confidence Not enough data
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Genome context
JH425391.1: 1282061-1282121 [+]

Database links

Mature abu-miR-33-5p

Accession MIMAT0042163
Description Astatotilapia burtoni abu-miR-33-5p mature miRNA
Sequence 1 - GUGCAUUGUAGUUGCAUUGCAU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381