miRBase entry: abu-mir-24a-2

Stem-loop abu-mir-24a-2


Accession
MI0033907
Description
Astatotilapia burtoni abu-mir-24a-2 precursor miRNA


Sequence

gcuuucugagcugacagcgguuugaucaaauacacUGGCUCAGUUCAGCAGGAAC
.(((.((((((((((((.(..((.....))..).)))..))))))))).)))...

Structure
--g   u         --   c gu  g 
   cuu cugagcuga  cag g  uu a
   ||| |||||||||  ||| |  || u
   GGA GACUUGACU  GUc c  aa c
CAA   C         CG   a au  a 


Annotation confidence Not enough data
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Genome context
JH425365.1: 1529389-1529443 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from abu-mir-24a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature abu-miR-24a

Accession MIMAT0042140
Description Astatotilapia burtoni abu-miR-24a mature miRNA
Sequence 36 - UGGCUCAGUUCAGCAGGAAC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381