miRBase entry: abu-mir-722-1

Stem-loop abu-mir-722-1


Accession
MI0033925
Description
Astatotilapia burtoni abu-mir-722-1 precursor miRNA


Sequence

uuugaaacguuuuagcuaaaaauguuuccaugcucaagguguuUUUUGCAGAAACGUUUCAGAUU
(((((((((((((.((.(((((((...((........))))))))).)).)))))))))))))..

Structure
--             a  u       uuu  aug 
  uuugaaacguuuu gc aaaaaug   cc   c
  ||||||||||||| || |||||||   ||    
  AGACUUUGCAAAG CG UUUuugu   gg   u
UU             A  U       ---  aac 


Annotation confidence Not enough data
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Genome context
JH426138.1: 104931-104995 [+]

Database links

Mature abu-miR-722

Accession MIMAT0042188
Description Astatotilapia burtoni abu-miR-722 mature miRNA
Sequence 44 - UUUUGCAGAAACGUUUCAGAUU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381