miRBase entry: abu-mir-457

Stem-loop abu-mir-457

Accession

MI0033933

Description

Astatotilapia burtoni abu-mir-457 precursor miRNA

Sequence

UAGCAGCACAUCAUUACUGGUAuuuuucacugcauuaccaguauguuaugugcugcuucu
.((((((((((...((((((((.............))))))))....))))))))))...

Structure

--U          -CAU        uuuuu 
   AGCAGCACAU    UACUGGUA     c
   ||||||||||    ||||||||     a
   ucgucgugua    augaccau     c
ucu          uugu        uacgu

Annotation confidence Not enough data

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Genome context

JH425774.1: 57023-57082 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-457

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature abu-miR-457

Accession	MIMAT0042194
Description	Astatotilapia burtoni abu-miR-457 mature miRNA
Sequence	1 - UAGCAGCACAUCAUUACUGGUA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381