Stem-loop abu-mir-551

Accession

MI0033940

Description

Astatotilapia burtoni abu-mir-551 precursor miRNA

Sequence

gaaaccaaguguggguguggucugaaaaagaaauaugGCGACCCAUCCUUUGUUUCUG
(((((.(((.((((((((.((((.....)))....).)).)))))).))).)))))..

Structure

--     c   u      -  g ----   g 
  gaaac aag gugggu gu g    ucu a
  ||||| ||| |||||| || |    ||| a
  CUUUG UUC UACCCA CG u    aga a
GU     U   C      G  g auaa   a 

Annotation confidence Not enough data

Genome context

JH425745.1: 466958-467015 [-]

Mature abu-miR-551

• Accession: MIMAT0042203
• Description: Astatotilapia burtoni abu-miR-551 mature miRNA
• Sequence: 38 - GCGACCCAUCCUUUGUUUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381