miRBase entry: abu-mir-7132a

Stem-loop abu-mir-7132a


Accession
MI0033954
Description
Astatotilapia burtoni abu-mir-7132a precursor miRNA


Sequence

GACUUGGUCAAAGCUCCUCAGCagauugaagugacucUGAGGCGUUUAGAACAAGUUCA
((((((.((.((((.((((((.((..........)))))))).)))).)).))))))..

Structure
--      G  A    U      C  auug 
  GACUUG UC AAGC CCUCAG ag    a
  |||||| || |||| |||||| ||     
  UUGAAC AG UUUG GGAGUc uc    a
AC      A  A    C      -  agug 


Annotation confidence Not enough data
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Genome context
JH425492.1: 196160-196218 [-]

Database links

Mature abu-miR-7132a-5p

Accession MIMAT0042215
Description Astatotilapia burtoni abu-miR-7132a-5p mature miRNA
Sequence 1 - GACUUGGUCAAAGCUCCUCAGC - 22
Evidence experimental
Illumina [1]

Mature abu-miR-7132a-3p

Accession MIMAT0042216
Description Astatotilapia burtoni abu-miR-7132a-3p mature miRNA
Sequence 38 - UGAGGCGUUUAGAACAAGUUCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381