Stem-loop abu-mir-29c

Accession

MI0033958

Description

Astatotilapia burtoni abu-mir-29c precursor miRNA

Sequence

CUGAUUUCAUUUGGUGACGUAGAuguuuguacacagucuCUAGCACCAUAUGAAAUCAGUGU
((((((((((.(((((.(.((((.(.(((....))).))))))))))).))))))))))...

Structure

---          U     A G    u u   u 
   CUGAUUUCAU UGGUG C UAGA g uug a
   |||||||||| ||||| | |||| | |||  
   GACUAAAGUA ACCAC G AUCu c gac c
UGU          U     - -    - u   a 

Annotation confidence Not enough data

Genome context

JH425594.1: 6884-6945 [-]

Mature abu-miR-29c-5p

• Accession: MIMAT0042221
• Description: Astatotilapia burtoni abu-miR-29c-5p mature miRNA
• Sequence: 1 - CUGAUUUCAUUUGGUGACGUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-29c-3p

• Accession: MIMAT0042222
• Description: Astatotilapia burtoni abu-miR-29c-3p mature miRNA
• Sequence: 40 - CUAGCACCAUAUGAAAUCAGUGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381