Stem-loop abu-mir-10543

Accession

MI0033962

Description

Astatotilapia burtoni abu-mir-10543 precursor miRNA

Sequence

uuuguccucgcuuugaucuagugauuauuaccaguucAUUGGCUCUGUAGAGGACUGGA
...((((((.....((.(((((((...........))))))).))....))))))....

Structure

-uuu      gcuuu  u       uuau 
    guccuc     ga cuaguga    u
    ||||||     || |||||||    a
    CAGGAG     CU GGUUAcu    c
AGGU      -AUGU  C       ugac 

Annotation confidence Not enough data

Genome context

JH425352.1: 745414-745472 [+]

Mature abu-miR-10543

• Accession: MIMAT0042227
• Description: Astatotilapia burtoni abu-miR-10543 mature miRNA
• Sequence: 38 - AUUGGCUCUGUAGAGGACUGGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381