Stem-loop abu-mir-10544

Accession

MI0033964

Description

Astatotilapia burtoni abu-mir-10544 precursor miRNA

Sequence

UAGGCGUGUCACUGCGUGUCACAgucacugcuugcgcacggggccacgcccugc
..((((((...((.(((((((.(((....))))).))))).)).))))))....

Structure

--UA      UCA  G     -  C   c 
    GGCGUG   CU CGUGU CA Agu a
    ||||||   || ||||| || |||  
    ccgcac   gg gcacg gu ucg c
cguc      --c  g     c  -   u 

Annotation confidence Not enough data

Genome context

JH425512.1: 1106063-1106116 [-]

Mature abu-miR-10544

• Accession: MIMAT0042229
• Description: Astatotilapia burtoni abu-miR-10544 mature miRNA
• Sequence: 1 - UAGGCGUGUCACUGCGUGUCACA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381