miRBase entry: abu-mir-150

Stem-loop abu-mir-150


Accession
MI0033981
Description
Astatotilapia burtoni abu-mir-150 precursor miRNA


Sequence

ACUCCCAAUCCUUGUACCAGUGucuugacaccagugacgcuggacggguuuugggggggcu
.(((((((..(((((.(((((((((((....))).)))))))))))))..)))))))....

Structure
---A       UC     A        -   a 
    CUCCCAA  CUUGU CCAGUGuc uug c
    |||||||  ||||| |||||||| |||  
    ggggguu  gggca ggucgcag gac a
ucgg       uu     -        u   c 


Annotation confidence Not enough data
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Genome context
JH425402.1: 1757108-1757168 [-]

Database links

Mature abu-miR-150

Accession MIMAT0042248
Description Astatotilapia burtoni abu-miR-150 mature miRNA
Sequence 1 - ACUCCCAAUCCUUGUACCAGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381