miRBase entry: abu-mir-210

Stem-loop abu-mir-210


Accession
MI0033990
Description
Astatotilapia burtoni abu-mir-210 precursor miRNA


Sequence

AGCCACUGACUAACGCACAUUGugccaguuuccaguuccacugugcgugugacagcggcuaa
((((.(((.(..(((((((.((.((.........))..)).)))))))..).))).))))..

Structure
--    A   A UA       U  -u  cag 
  AGCC CUG C  ACGCACA UG  gc   u
  |||| ||| |  ||||||| ||  ||   u
  ucgg gac g  ugcgugu ac  ug   u
aa    c   a ug       c  cu  acc 


Annotation confidence Not enough data
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Genome context
JH425678.1: 622378-622439 [-]

Database links

Mature abu-miR-210

Accession MIMAT0042256
Description Astatotilapia burtoni abu-miR-210 mature miRNA
Sequence 1 - AGCCACUGACUAACGCACAUUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381