miRBase entry: abu-mir-10564

Stem-loop abu-mir-10564


Accession
MI0034007
Description
Astatotilapia burtoni abu-mir-10564 precursor miRNA


Sequence

AACACAACGCGAAGAAAUAUGCacuacuaagugcauauuucuucgcguuguguuuu
(((((((((((((((((((((((((....)))))))))))))))))))))))))..

Structure
--                         a 
  AACACAACGCGAAGAAAUAUGCacu c
  |||||||||||||||||||||||||  
  uuguguugcgcuucuuuauacguga u
uu                         a 


Annotation confidence Not enough data
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Genome context
JH425556.1: 775358-775413 [-]

Database links

Mature abu-miR-10564

Accession MIMAT0042272
Description Astatotilapia burtoni abu-miR-10564 mature miRNA
Sequence 1 - AACACAACGCGAAGAAAUAUGC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381