miRBase entry: abu-mir-10556b

Stem-loop abu-mir-10556b


Accession
MI0034008
Description
Astatotilapia burtoni abu-mir-10556b precursor miRNA


Sequence

GGAAGAAAAACGUCUGGACUUCuuuaaguuucuugaagaugaaguccagaugcuuuucuuucca
(((((((((.((((((((((((((((((...))))))))...)))))))))).)))))))))..

Structure
--         A          ---        u 
  GGAAGAAAA CGUCUGGACU   UCuuuaag  
  ||||||||| ||||||||||   |||||||| u
  cuuucuuuu guagaccuga   agaaguuc  
ac         c          agu        u 


Annotation confidence Not enough data
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Genome context
JH425781.1: 291615-291678 [-]

Database links

Mature abu-miR-10556b

Accession MIMAT0042273
Description Astatotilapia burtoni abu-miR-10556b mature miRNA
Sequence 1 - GGAAGAAAAACGUCUGGACUUC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381