miRBase entry: mze-mir-183-1

Stem-loop mze-mir-183-1

Accession

MI0034015

Description

Metriaclima zebra mze-mir-183-1 precursor miRNA

Sequence

UAUGGCACUGGUAGAAUUCACUGucacagcacacuaucagugaauuaccauagggccauaaa
((((((..(((((..((((((((..............)))))))))))))....))))))..

Structure

--      --AC     GA        ucacag 
  UAUGGC    UGGUA  AUUCACUG      c
  ||||||    |||||  ||||||||       
  auaccg    accau  uaagugac      a
aa      ggau     --        uaucac

Annotation confidence Not enough data

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Genome context

AGTA03000076.1: 164951-165012 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-183-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-183

Accession	MIMAT0042279
Description	Metriaclima zebra mze-miR-183 mature miRNA
Sequence	1 - UAUGGCACUGGUAGAAUUCACUG - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381