miRBase entry: mze-mir-92a-2

Stem-loop mze-mir-92a-2

Accession

MI0034021

Description

Metriaclima zebra mze-mir-92a-2 precursor miRNA

Sequence

agguggggaucgguagcaaugcuguguuccuccaggUAUUGCACUUGUCCCGGCCUGU
((((.(((((.(((.((((((((..(.....)..))))))))))).))))).))))..

Structure

--    g     c   a        gu u 
  aggu gggau ggu gcaaugcu  g u
  |||| ||||| ||| ||||||||  | c
  UCCG CCCUG UCA CGUUAUgg  c c
UG    G     U   -        ac u

Annotation confidence Not enough data

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Genome context

AGTA03000036.1: 4188129-4188186 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-92a

Accession	MIMAT0042283
Description	Metriaclima zebra mze-miR-92a mature miRNA
Sequence	37 - UAUUGCACUUGUCCCGGCCUGU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381