miRBase entry: mze-mir-100-1

Accession

MI0034039

Description

Metriaclima zebra mze-mir-100-1 precursor miRNA

Sequence

AACCCGUAGAUCCGAACUUGUGuuaagugacaccacaagcuuguaucuacaggucug
.(((.((((((.(((.((((((...........)))))).))).)))))).)))...

Structure

--A   C      C   A      uuaa 
   ACC GUAGAU CGA CUUGUG    g
   ||| |||||| ||| ||||||    u
   ugg caucua guu gaacac    g
guc   a      u   c      caca

Annotation confidence Not enough data

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Genome context

AGTA03000072.1: 2128468-2128524 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mze-mir-100-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042288
Description	Metriaclima zebra mze-miR-100 mature miRNA
Sequence	1 - AACCCGUAGAUCCGAACUUGUG - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381