miRBase entry: mze-let-7d-1

Stem-loop mze-let-7d-1

Accession

MI0034061

Description

Metriaclima zebra mze-let-7d-1 precursor miRNA

Sequence

UGAGGUAGUUGGUUGUAUGGUUucgcauaauaaacagcauggagauaacuguacaaccuucuagcuuucc
.(((.(((..((((((((((((((.(((..........)))..)).))))))))))))..))).)))...

Structure

--U   G   UU            -  -g   aaua 
   GAG UAG  GGUUGUAUGGUU uc  cau    a
   ||| |||  |||||||||||| ||  |||     
   uuc auc  ccaacaugucaa ag  gua    a
ccu   g   uu            u  ag   cgac

Annotation confidence Not enough data

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Genome context

AGTA03000111.1: 70326-70395 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-let-7d-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-let-7d

Accession	MIMAT0042301
Description	Metriaclima zebra mze-let-7d mature miRNA
Sequence	1 - UGAGGUAGUUGGUUGUAUGGUU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381