miRBase entry: mze-mir-125a-1

Stem-loop mze-mir-125a-1

Accession

MI0034072

Description

Metriaclima zebra mze-mir-125a-1 precursor miRNA

Sequence

UCCCUGAGACCCUUAACCUGUGaugauaugaaaggucacaggugagguccuugggaac
((((.(((..(((((.((((((((..........)))))))))))))..)))))))..

Structure

--    U   AC     A        gaua 
  UCCC GAG  CCUUA CCUGUGau    u
  |||| |||  ||||| ||||||||     
  aggg uuc  ggagu ggacacug    g
ca    -   cu     -        gaaa

Annotation confidence Not enough data

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Genome context

AGTA03000049.1: 4055428-4055485 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-125a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-125a

Accession	MIMAT0042310
Description	Metriaclima zebra mze-miR-125a mature miRNA
Sequence	1 - UCCCUGAGACCCUUAACCUGUG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381