miRBase entry: mze-mir-153a-1

Stem-loop mze-mir-153a-1


Accession
MI0034079
Description
Metriaclima zebra mze-mir-153a-1 precursor miRNA


Sequence

ucauuuuugugauguugcagcuaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure
--             gu       -a  aa 
  ucauuuuugugau  ugcagcu  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  aa 


Annotation confidence Not enough data
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Genome context
AGTA03000194.1: 380904-380963 [+]

Database links

Mature mze-miR-153a

Accession MIMAT0042315
Description Metriaclima zebra mze-miR-153a mature miRNA
Sequence 39 - UUGCAUAGUCACAAAAGUGAUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381