miRBase entry: mze-mir-214-2

Stem-loop mze-mir-214-2

Accession

MI0034090

Description

Metriaclima zebra mze-mir-214-2 precursor miRNA

Sequence

ugccuaucuacacuugcugugcagaauauccuccaaccuguACAGCAGGCACAGACAGGCAGA
(((((.(((...((((((((((((.............))))))))))))...))).)))))..

Structure

--     a   aca            aauau 
  ugccu ucu   cuugcugugcag     c
  ||||| |||   ||||||||||||     c
  ACGGA AGA   GGACGACAuguc     u
AG     C   CAC            caacc

Annotation confidence Not enough data

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Genome context

AGTA03000234.1: 1311382-1311444 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-214-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-214

Accession	MIMAT0042320
Description	Metriaclima zebra mze-miR-214 mature miRNA
Sequence	42 - ACAGCAGGCACAGACAGGCAGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381