miRBase entry: mze-mir-99b

Stem-loop mze-mir-99b


Accession
MI0034096
Description
Metriaclima zebra mze-mir-99b precursor miRNA


Sequence

AACCCGUAGAUCCGAUCUUGUGgcgaaucugacagcacaagcucgccucugugggucuu
.(((((((((..(((.((((((.............)))))).)))..)))))))))...

Structure
--A         UC   U      gcgaa 
   ACCCGUAGA  CGA CUUGUG     u
   |||||||||  ||| ||||||     c
   ugggugucu  gcu gaacac     u
uuc         cc   c      gacag 


Annotation confidence Not enough data
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Genome context
AGTA03000089.1: 2743173-2743231 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-99b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-99b

Accession MIMAT0042328
Description Metriaclima zebra mze-miR-99b mature miRNA
Sequence 1 - AACCCGUAGAUCCGAUCUUGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381