miRBase entry: mze-mir-142-2

Stem-loop mze-mir-142-2


Accession
MI0034111
Description
Metriaclima zebra mze-mir-142-2 precursor miRNA


Sequence

CAUAAAGUAGAAAGCACUACUaaacuuuacuacacaguguaguguuuccuacuuuauggaug
((((((((((.(((((((((..................))))))))).))))))))))....

Structure
----          A         Uaaacuuu 
    CAUAAAGUAG AAGCACUAC        a
    |||||||||| |||||||||         
    guauuucauc uuugugaug        c
guag          c         ugacacau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTA03000129.1: 2728139-2728200 [+]

Database links

Mature mze-miR-142

Accession MIMAT0042338
Description Metriaclima zebra mze-miR-142 mature miRNA
Sequence 1 - CAUAAAGUAGAAAGCACUACU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381