miRBase entry: mze-mir-190b

Stem-loop mze-mir-190b


Accession
MI0034113
Description
Metriaclima zebra mze-mir-190b precursor miRNA


Sequence

UGAUAUGUUUGAUAUUCGGUUGuucuugugcuuuauaaugucaacuaaauaucagacauauuccu
.(((((((((((((((.(((((...(((((...)))))...))))).)))))))))))))))...

Structure
--U               C     uuc     c 
   GAUAUGUUUGAUAUU GGUUG   uugug  
   ||||||||||||||| |||||   ||||| u
   uuauacagacuauaa ucaac   aauau  
ucc               a     ugu     u 


Annotation confidence Not enough data
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Genome context
AGTA03000034.1: 3527420-3527484 [-]

Database links

Mature mze-miR-190b

Accession MIMAT0042341
Description Metriaclima zebra mze-miR-190b mature miRNA
Sequence 1 - UGAUAUGUUUGAUAUUCGGUUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381