miRBase entry: mze-mir-138-1

Stem-loop mze-mir-138-1


Accession
MI0034120
Description
Metriaclima zebra mze-mir-138-1 precursor miRNA


Sequence

AGCUGGUGUUGUGAAUCAGGCCGaugacacacaccucuuauaacccggcuauuucacaacaccagggu
..(((((((((((((...(((((......................)))))..)))))))))))))...

Structure
-AG             UCA     augacacaca 
   CUGGUGUUGUGAA   GGCCG          c
   |||||||||||||   |||||           
   gaccacaacacuu   ucggc          c
ugg             -ua     ccaauauucu 


Annotation confidence Not enough data
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Genome context
AGTA03000161.1: 1350020-1350087 [+]

Database links

Mature mze-miR-138

Accession MIMAT0042348
Description Metriaclima zebra mze-miR-138 mature miRNA
Sequence 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381