miRBase entry: mze-mir-1-1

Stem-loop mze-mir-1-1


Accession
MI0034133
Description
Metriaclima zebra mze-mir-1-1 precursor miRNA


Sequence

acauacuucuuuauaugcccauaugaacaagagcaacuaUGGAAUGUAAAGAAGUAUGUAU
((((((((((((((((..(((((((........))..))))).))))))))))))))))..

Structure
--                gc     --  aac 
  acauacuucuuuauau  ccaua  ug   a
  ||||||||||||||||  |||||  ||    
  UGUAUGAAGAAAUGUA  GGUau  ac   a
UA                -A     ca  gag 


Annotation confidence Not enough data
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Genome context
AGTA03000146.1: 222097-222157 [+]

Database links

Mature mze-miR-1

Accession MIMAT0042359
Description Metriaclima zebra mze-miR-1 mature miRNA
Sequence 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381