miRBase entry: mze-mir-15a

Stem-loop mze-mir-15a

Accession

MI0034142

Description

Metriaclima zebra mze-mir-15a precursor miRNA

Sequence

UAGCAGCACGGAAUGGUUUGUGgguuauacugagaugcaggccauacugugcugccgca
..(((((((((.((((((((((..(((...)))..)))))))))).)))))))))....

Structure

--UA         A          gg   u 
    GCAGCACGG AUGGUUUGUG  uua  
    ||||||||| ||||||||||  ||| a
    cgucguguc uaccggacgu  agu  
acgc         a          ag   c

Annotation confidence Not enough data

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Genome context

AGTA03000193.1: 2298832-2298890 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-15a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-15a

Accession	MIMAT0042363
Description	Metriaclima zebra mze-miR-15a mature miRNA
Sequence	1 - UAGCAGCACGGAAUGGUUUGUG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381