miRBase entry: mze-mir-106

Stem-loop mze-mir-106


Accession
MI0034146
Description
Metriaclima zebra mze-mir-106 precursor miRNA


Sequence

UAAAGUGCUUACAGUGCAGGUAGugaugauaaucuggccuacugcauugugagcacuucuuu
..(((((((((((((((((...(((((....)))..))...)))))))))))))))))....

Structure
--UA                 GUA  --   g 
    AAGUGCUUACAGUGCAG   Gu  gau a
    |||||||||||||||||   ||  |||  
    uucacgaguguuacguc   cg  cua u
uuuc                 auc  gu   a 


Annotation confidence Not enough data
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Genome context
AGTA03000037.1: 128261-128322 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from mze-mir-106
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-106

Accession MIMAT0042366
Description Metriaclima zebra mze-miR-106 mature miRNA
Sequence 1 - UAAAGUGCUUACAGUGCAGGUAG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381