miRBase entry: mze-mir-24a-1

Stem-loop mze-mir-24a-1


Accession
MI0034151
Description
Metriaclima zebra mze-mir-24a-1 precursor miRNA


Sequence

ugccuacugagcugauaaucaguccuacagaaucacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((...(((((...........))))).))))))))).)))...

Structure
-ug   a         uaa     ccua 
   ccu cugagcuga   ucagu    c
   ||| |||||||||   |||||    a
   GGA GACUUGACU   GGUca    g
CAA   C         --C     cuaa 


Annotation confidence Not enough data
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Genome context
AGTA03000056.1: 3239640-3239695 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-24a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-24a

Accession MIMAT0042369
Description Metriaclima zebra mze-miR-24a mature miRNA
Sequence 37 - UGGCUCAGUUCAGCAGGAAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381