miRBase entry: mze-mir-132a

Stem-loop mze-mir-132a

Accession

MI0034153

Description

Metriaclima zebra mze-mir-132a precursor miRNA

Sequence

accguggcauuagauuguuacuguaguaacagcaccaguggUAACAGUCUACAGCCAUGGUC
((((((((..((((((((((((((.((....))))....))))))))))))..)))))))).

Structure

-        au            ----  a  a 
 accguggc  uagauuguuacu    gu gu a
 ||||||||  ||||||||||||    || ||  
 UGGUACCG  AUCUGACAAUgg    ca cg c
C        AC            ugac  -  a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

AGTA03000129.1: 1608187-1608248 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-132a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-132a

Accession	MIMAT0042371
Description	Metriaclima zebra mze-miR-132a mature miRNA
Sequence	42 - UAACAGUCUACAGCCAUGGUC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381