miRBase entry: mze-mir-365

Stem-loop mze-mir-365

Accession

MI0034169

Description

Metriaclima zebra mze-mir-365 precursor miRNA

Sequence

agggacuuuuaggggcagcuguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAU
(((((.(((((((((((((((.(((.....))).)))).....))))))))))).)))))..

Structure

--     c           -----    u   u 
  aggga uuuuaggggca     gcug guu u
  ||||| |||||||||||     |||| ||| a
  UUCCU AAAAUCCCCGU     ugac caa u
UA     A           AAUac    c   u

Annotation confidence Not enough data

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Genome context

AGTA03000004.1: 482598-482659 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-365

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-365

Accession	MIMAT0042384
Description	Metriaclima zebra mze-miR-365 mature miRNA
Sequence	41 - UAAUGCCCCUAAAAAUCCUUAU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381