miRBase entry: mze-mir-23a-2

Stem-loop mze-mir-23a-2


Accession
MI0034185
Description
Metriaclima zebra mze-mir-23a-2 precursor miRNA


Sequence

gguuccuggcaccgugauuugaugcacaaagagaaacaaaaAUCACAUUGCCAGGGAUUUCCA
.((((((((((..(((((((...................)))))))..)))))))))).....

Structure
----g          cc       gaugcaca 
     guuccuggca  gugauuu        a
     ||||||||||  |||||||        a
     UAGGGACCGU  CACUAaa        g
ACCUU          UA       aacaaaga 


Annotation confidence Not enough data
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Genome context
AGTA03000280.1: 168241-168303 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-23a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-23a

Accession MIMAT0042396
Description Metriaclima zebra mze-miR-23a mature miRNA
Sequence 42 - AUCACAUUGCCAGGGAUUUCCA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381