miRBase entry: mze-mir-23a-3

Stem-loop mze-mir-23a-3


Accession
MI0034187
Description
Metriaclima zebra mze-mir-23a-3 precursor miRNA


Sequence

gggauuccuggcagagugauuugguugugauguaauguaaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((.....)))).)))))))).))))))))))))))..

Structure
--              a        -    u 
  gggauuccuggcag gugauuug guug g
  |||||||||||||| |||||||| |||| a
  CUUUAGGGACCGUU CACUAaau uaau u
AC              A        g    g 


Annotation confidence Not enough data
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Genome context
AGTA03000035.1: 9111493-9111554 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-23a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-23a

Accession MIMAT0042396
Description Metriaclima zebra mze-miR-23a mature miRNA
Sequence 41 - AUCACAUUGCCAGGGAUUUCCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381