miRBase entry: mze-mir-458

Stem-loop mze-mir-458


Accession
MI0034208
Description
Metriaclima zebra mze-mir-458 precursor miRNA


Sequence

agcgccauuuucagagcuauaagagugaaaguuaucAUAGCUCUUUAAAUGGUACUGC
((.(((((((..((((((((..((..........))))))))))..))))))).))..

Structure
--  c       uc        aa  guga 
  ag gccauuu  agagcuau  ga    a
  || |||||||  ||||||||  ||     
  UC UGGUAAA  UCUCGAUA  cu    a
CG  A       UU        --  auug 


Annotation confidence Not enough data
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Genome context
AGTA03000155.1: 706332-706389 [-]

Database links

Mature mze-miR-458

Accession MIMAT0042404
Description Metriaclima zebra mze-miR-458 mature miRNA
Sequence 37 - AUAGCUCUUUAAAUGGUACUGC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381