miRBase entry: mze-mir-15b

Stem-loop mze-mir-15b

Accession

MI0034210

Description

Metriaclima zebra mze-mir-15b precursor miRNA

Sequence

UAGCAGCGCAUCAUGGUUUGAaacaauguggaaaaggugcgaaccauaauuugcugcuuua
.(((((((.((.((((((((..((..(......)..)).)))))))).)).)))))))...

Structure

--U       C  C        Aa  aa gu 
   AGCAGCG AU AUGGUUUG  ac  u  g
   ||||||| || ||||||||  ||  |   
   ucgucgu ua uaccaagc  ug  a  g
auu       u  a        -g  ga aa

Annotation confidence Not enough data

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Genome context

AGTA03000095.1: 1812803-1812863 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-15b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-15b

Accession	MIMAT0042406
Description	Metriaclima zebra mze-miR-15b mature miRNA
Sequence	1 - UAGCAGCGCAUCAUGGUUUGA - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381