miRBase entry: mze-mir-23c

Stem-loop mze-mir-23c

Accession

MI0034211

Description

Metriaclima zebra mze-mir-23c precursor miRNA

Sequence

ugugucucuggcaagaugauuugggccacaaaguugaaAUCACAUUGCCAGAGAUUACUG
.(((((((((((((..((((((.(((......))).))))))..)))))))))).)))..

Structure

-u   -          ga      g   ca 
  gug ucucuggcaa  ugauuu ggc  c
  ||| ||||||||||  |||||| |||   
  CAU AGAGACCGUU  ACUAaa uug  a
GU   U          AC      g   aa

Annotation confidence Not enough data

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Genome context

AGTA03000062.1: 2305399-2305458 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-23c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-23c

Accession	MIMAT0042407
Description	Metriaclima zebra mze-miR-23c mature miRNA
Sequence	39 - AUCACAUUGCCAGAGAUUACUG - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381