miRBase entry: mze-mir-728

Stem-loop mze-mir-728


Accession
MI0034231
Description
Metriaclima zebra mze-mir-728 precursor miRNA


Sequence

aaauguaguagacuauaaguauacaugaaacucagaaaguAUACUAAGUAUACUACGUUUAC
((((((((((.(((...(((((((..............))))))).))).))))))))))..

Structure
--          g   aua       augaaa 
  aaauguagua acu   aguauac      c
  |||||||||| |||   |||||||       
  UUUGCAUCAU UGA   UCAUAug      u
CA          A   --A       aaagac 


Annotation confidence Not enough data
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Genome context
AGTA03000234.1: 815531-815592 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-728
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-728

Accession MIMAT0042425
Description Metriaclima zebra mze-miR-728 mature miRNA
Sequence 41 - AUACUAAGUAUACUACGUUUAC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381