miRBase entry: mze-mir-212b

Stem-loop mze-mir-212b

Accession

MI0034239

Description

Metriaclima zebra mze-mir-212b precursor miRNA

Sequence

ACCUUGGCUUUAGACUGCUUACUgcuuauacaguaucaaaguacaguaacagucuacagucauggcu
.((.(((((.(((((((.((((((....(((.........)))))))))))))))).))))).))..

Structure

-A  U     U       C      cuua   agu 
  CC UGGCU UAGACUG UUACUg    uac   a
  || ||||| ||||||| ||||||    |||   u
  gg acuga aucugac aaugac    aug   c
uc  u     c       -      ----   aaa

Annotation confidence Not enough data

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Genome context

AGTA03000075.1: 717737-717803 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-212b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-212b

Accession	MIMAT0042433
Description	Metriaclima zebra mze-miR-212b mature miRNA
Sequence	1 - ACCUUGGCUUUAGACUGCUUACU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381