miRBase entry: mze-mir-449b

Accession

MI0034251

Description

Metriaclima zebra mze-mir-449b precursor miRNA

Sequence

UGGCAGUGUAAUGUUAGCUGACguuucuucagccagcucacacugcucugcuacu
((((((.(((.(((.(((((.(.........).))))).))).))).))))))..

Structure

--      U   A   U     A guu 
  UGGCAG GUA UGU AGCUG C   u
  |||||| ||| ||| ||||| |   c
  aucguc cgu aca ucgac g   u
uc      u   c   c     c acu

Annotation confidence Not enough data

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Genome context

AGTA03000061.1: 1647014-1647068 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-449b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042447
Description	Metriaclima zebra mze-miR-449b mature miRNA
Sequence	1 - UGGCAGUGUAAUGUUAGCUGAC - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381