miRBase entry: mze-mir-8160b

Stem-loop mze-mir-8160b


Accession
MI0034254
Description
Metriaclima zebra mze-mir-8160b precursor miRNA


Sequence

AGAAUAAUGCCAGCAGUCGGCCgugaacucagugucaggccagugcugguguuauugaga
..(((((((((((((.(.((((.(((........)))))))).)))))))))))))....

Structure
--AG             G C    g   acu 
    AAUAAUGCCAGCA U GGCC uga   c
    ||||||||||||| | |||| |||    
    uuauuguggucgu a ccgg acu   a
agag             g -    -   gug 


Annotation confidence Not enough data
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Genome context
AGTA03000124.1: 2277191-2277250 [-]

Database links

Mature mze-miR-8160b

Accession MIMAT0042450
Description Metriaclima zebra mze-miR-8160b mature miRNA
Sequence 1 - AGAAUAAUGCCAGCAGUCGGCC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381