miRBase entry: nbr-mir-10a-1

Stem-loop nbr-mir-10a-1


Accession
MI0034272
Description
Neolamprologus brichardi nbr-mir-10a-1 precursor miRNA


Sequence

UACCCUGUAGAACCGAAUUUGUgugaugaaaccagauucacagauucgauuuuaggggagu
...(((.(((((.((((((((((...((....))....)))))))))).))))).)))...

Structure
UAC   G     C          -uga  a 
   CCU UAGAA CGAAUUUGUg    ug a
   ||| ||||| ||||||||||    ||  
   ggg auuuu gcuuagacac    ac a
uga   g     a          uuag  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH422286.1: 7050678-7050738 [-]

Database links

Mature nbr-miR-10a

Accession MIMAT0042465
Description Neolamprologus brichardi nbr-miR-10a mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381