miRBase entry: nbr-mir-9-2

Stem-loop nbr-mir-9-2


Accession
MI0034280
Description
Neolamprologus brichardi nbr-mir-9-2 precursor miRNA


Sequence

UCUUUGGUUAUCUAGCUGUAUGaguuuuaauuucauaaagcuagagaaccgaaagua
..(((((((.(((((((.((((((.......)))))).))))))).)))))))....

Structure
--UC       A       G      uu 
    UUUGGUU UCUAGCU UAUGag  u
    ||||||| ||||||| ||||||  u
    aagccaa agaucga auacuu  a
auga       g       a      ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH422283.1: 5552068-5552124 [+]

Database links

Mature nbr-miR-9

Accession MIMAT0042470
Description Neolamprologus brichardi nbr-miR-9 mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381