miRBase entry: nbr-mir-92a-1

Stem-loop nbr-mir-92a-1

Accession

MI0034281

Description

Neolamprologus brichardi nbr-mir-92a-1 precursor miRNA

Sequence

agguugggagagguagcaaugcucugugcuuguguggUAUUGCACUUGUCCCGGCCUGU
(((((((((.((((.((((((((....((....)))))))))))))).)))))))))..

Structure

--         g    a        cugu  u 
  agguuggga aggu gcaaugcu    gc u
  ||||||||| |||| ||||||||    ||  
  UCCGGCCCU UUCA CGUUAUgg    ug g
UG         G    -        ----  u

Annotation confidence Not enough data

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Genome context

JH422286.1: 6064717-6064775 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from nbr-mir-92a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature nbr-miR-92a

Accession	MIMAT0042471
Description	Neolamprologus brichardi nbr-miR-92a mature miRNA
Sequence	38 - UAUUGCACUUGUCCCGGCCUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381