miRBase entry: nbr-mir-21-1

Stem-loop nbr-mir-21-1


Accession
MI0034284
Description
Neolamprologus brichardi nbr-mir-21-1 precursor miRNA


Sequence

UAGCUUAUCAGACUGGUGUUGGCuguuggaugugcuuggcaacagcggucuguaagcuggc
(((((((.(((((((.(((((.(.((.......))..).))))).))))))))))))))..

Structure
--       U       G     G -u  ug 
  UAGCUUA CAGACUG UGUUG C  gu  g
  ||||||| ||||||| ||||| |  ||  a
  gucgaau gucuggc acaac g  cg  u
cg       -       g     g uu  ug 


Annotation confidence Not enough data
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Genome context
JH422340.1: 665363-665423 [+]

Database links

Mature nbr-miR-21

Accession MIMAT0042472
Description Neolamprologus brichardi nbr-miR-21 mature miRNA
Sequence 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381