miRBase entry: nbr-mir-153a-1

Stem-loop nbr-mir-153a-1


Accession
MI0034323
Description
Neolamprologus brichardi nbr-mir-153a-1 precursor miRNA


Sequence

ucauuuuugugauguugcagcuaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure
--             gu       -a  aa 
  ucauuuuugugau  ugcagcu  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  aa 


Annotation confidence Not enough data
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Genome context
JH422501.1: 293969-294028 [-]

Database links

Mature nbr-miR-153a

Accession MIMAT0042492
Description Neolamprologus brichardi nbr-miR-153a mature miRNA
Sequence 39 - UUGCAUAGUCACAAAAGUGAUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381