miRBase entry: nbr-mir-206

Stem-loop nbr-mir-206


Accession
MI0034344
Description
Neolamprologus brichardi nbr-mir-206 precursor miRNA


Sequence

acaugcuuccuuauauccccauauuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure
--                cc     uuaau 
  acaugcuuccuuauau  ccaua     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc 


Annotation confidence Not enough data
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Genome context
JH422321.1: 2411015-2411074 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nbr-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nbr-miR-206

Accession MIMAT0042508
Description Neolamprologus brichardi nbr-miR-206 mature miRNA
Sequence 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381