miRBase entry: nbr-mir-190b

Stem-loop nbr-mir-190b


Accession
MI0034351
Description
Neolamprologus brichardi nbr-mir-190b precursor miRNA


Sequence

UGAUAUGUUUGAUAUUCGGUUGuucuugugcuuuauaaugucaacuaaauaucagacauauuccu
.(((((((((((((((.(((((...(((((...)))))...))))).)))))))))))))))...

Structure
--U               C     uuc     c 
   GAUAUGUUUGAUAUU GGUUG   uugug  
   ||||||||||||||| |||||   ||||| u
   uuauacagacuauaa ucaac   aauau  
ucc               a     ugu     u 


Annotation confidence Not enough data
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Genome context
JH422404.1: 1524395-1524459 [+]

Database links

Mature nbr-miR-190b

Accession MIMAT0042512
Description Neolamprologus brichardi nbr-miR-190b mature miRNA
Sequence 1 - UGAUAUGUUUGAUAUUCGGUUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381