miRBase entry: nbr-let-7i-1

Stem-loop nbr-let-7i-1


Accession
MI0034354
Description
Neolamprologus brichardi nbr-let-7i-1 precursor miRNA


Sequence

UGAGGUAGUAGUUUGUGCUGUUgguuggguugagacacugcccgcuauggagaugacugcgcaagcuacugccuugcu
.(((((((((((((((((.((((((.((((.........)))))))........))).)))))))))))))))))...

Structure
--U                 U   --------   u    uga 
   GAGGUAGUAGUUUGUGC GUU        ggu gggu   g
   ||||||||||||||||| |||        ||| ||||   a
   uuccgucaucgaacgcg cag        ucg cccg   c
ucg                 u   uagaggua   -    uca 


Annotation confidence Not enough data
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Genome context
JH422276.1: 12539479-12539556 [-]

Database links

Mature nbr-let-7i

Accession MIMAT0042515
Description Neolamprologus brichardi nbr-let-7i mature miRNA
Sequence 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381