miRBase entry: nbr-mir-1388

Stem-loop nbr-mir-1388


Accession
MI0034361
Description
Neolamprologus brichardi nbr-mir-1388 precursor miRNA


Sequence

AGGACUGUCCAACCUGAGAAUGgugauuauaggcucaaucucagguucgucagcccaug
.((.(((.(.(((((((((.((((........)).)).))))))))).).))).))...

Structure
--A  A   U C         A  -  gau 
   GG CUG C AACCUGAGA UG gu   u
   || ||| | ||||||||| || ||    
   cc gac g uuggacucu ac cg   a
gua  c   u c         a  u  gau 


Annotation confidence Not enough data
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Genome context
JH422317.1: 1005195-1005253 [+]

Database links

Mature nbr-miR-1388

Accession MIMAT0042520
Description Neolamprologus brichardi nbr-miR-1388 mature miRNA
Sequence 1 - AGGACUGUCCAACCUGAGAAUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381